Bioinformatician job description

Come Be Part of a Mission that Matters!
Neogen is seeking a Bioinformatician with a NGS and microbiology background. The ideal candidate will have experience with NGS workflows, design and analysis; PCR; oligonucleotide design and software tools. The candidate will be responsible for designing new genomics services, overseeing internal sequencing requests, troubleshooting QC samples, and maintaining databases. Programming script interpretation and writing is a plus. The position will report to Lansing, MI, but can be remote.

Essential Duties and Responsibilities:
Oversee scheduling of internal sequencing requests.Work with Genomics R&D team to establish methods centered on genome characterization and delivery of marketable genomic services including facilitating scale-up of new methods.Work with Molecular R&D team to identify unique nucleic acid targets for product development.Actively survey literature on new bioinformatic analytical technologies.Collaborate with information technology team to develop requirements and processes for new and existing products to facilitate automation where possible.Provide oral and written reports to relevant management.Aid in technical transfer of unique Genomics R&D product features and benefits to sales and marketing and assist in training and other activities to support effective implementation for the benefit of customers.Review output data and reports from current and future software platforms.Identify problems with current software and develop improvements or work with relevant parties, IT or outside vendors, to resolve issue.

Qualifications
Ph.D. in the field of Genomics, Molecular Biology, Computer Science or related with experience in bioinformatic analysis; or a Master of Science degree in Genomics, Molecular Biology, Computer Science or related with experience in bioinformatic analysis.Experience with bioinformatic skills necessary for the analysis of nest generation sequencing, assembly of genomes and Blasting.Proficiency with one or more DNA manipulation/analysis software, including Genome Analysis Tool Kit, Burrows Wheeler Alignment, Bowtie, SAMtools, bamtools, Tophat, SIFT, LiftOver, Geneious Primer, and/or DNAStar.Coding experience with languages; C/C++, JAVA, Fortan, R, Perl, and/or Python a plus.Proficiency with MS Office products.Good communication skills, both oral and written.

WHO IS NEOGEN:

From farm to fork, we offer solutions to enhance the quality, quantity and safety of the global food supply. Our food safety diagnostics are used within farming operations to the production facilities of most of the world's best-known food companies. Neogen's solutions are critical to the health and well-being of our customers' operations - and in turn their consumers. What we do matters!

Neogen's culture combines stability with a deep believe in providing professional and personal growth. Our Pillars of Trust - the principles which guide our everyday decision-making, include Openness, Honesty, Credibility, Respect, and Service. It's the belief in these characteristics that provide a consistent, happy and healthy work environment for our employees.

CAMRIS is a clinical and life sciences firm that realizes innovative solutions to challenges worldwide through high-quality, cost-effective program and research management services. We combine our proven systems with today's most effective, evidence-based best practices to improve the lives of people around the world. Our core practice areas include HIV/AIDS, microbiology and infectious disease research, vaccine research, development and production, global health security, biodefense, and clinical research.

CAMRIS attracts the next generation of scientists to work at premier government research and development institutions with state-of-the-art facilities and equipment, under world leaders in health research. Our exceptional benefits package that includes medical, dental and vision coverage, 401k plan with employer contribution, paid holidays, vacation, Medical and Flexible Spending Accounts, and life insurance. If you enjoy being a part of a high performing health and research organization dedicated to making the world a healthier place, please apply today!

We are seeking a Bioinformatics Scientist to provide services in support of the overall functions of the Laboratory of Immune System Biology (LISB).
Responsibilities
• Provide a variety of support using computational analysis, integration, and modeling of diverse
data sets, to include microarray, bulk and single-cell RNAseq, ATAC-seq, flow and CyTOF
phenotyping, serum proteome, SNP genotyping, and microbiome profiling.
• Provide data analysis using a “Bottom up” dynamical modeling, for example, starting from
networks of molecular/cellular interactions.
• Work and serve as the main point of contact with NIH/NIAID IT and high-performance
computing teams to set up, develop, and maintain necessary computational infrastructure and
tools for research.
• Assist with writing of scientific manuscripts.
• Assist with preparation of scientific presentations for both internal team members and outside at
scientific conferences.
Qualifications
• Ph.D. in computational biology, statistics, bioinformatics, systems biology, biophysics, or
relevant disciplines with hands-on research experience with bioinformatics and the analysis and
modeling of large-scale data sets.
• Expert knowledge of statistics and quantitative modeling.
• Expert knowledge of computer programming skills with proficiency in R and at least one
scripting language (Perl/Python/Ruby).
• Solid experience with database design and construction, and dynamical system theory and
modeling are pluses.
• Proficiency in C/C++ and/or Java as well as experience with multiple OS platforms (Windows,
MAC, Linux) are pluses.
• Research experience or formal training in the biomedical sciences is a plus.
• Strong organizational skills and able to prioritize.
• Strong communication skills - presenting and sharing data at meetings will be required.
CAMRIS International LLC offers competitive salaries and comprehensive benefits. Please submit your resume online at www.CAMRIS.com . CAMRIS is an Equal Opportunity/Affirmative Action Employer. All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, age, protected veteran status, disability status, or any other characteristic protected by any applicable federal, state, or local law.
Full vaccination against COVID-19, defined as two doses of Moderna, two doses of Pfizer, or one dose of Johnson & Johnson's Janssen, is required for this position.

The Harvard Chan Bioinformatics Core (HBC) is a center for bioinformatics research, services and training at the Harvard T.H. Chan School of Public Health. We work closely with biomedical scientists across Harvard to implement approaches for analysis, interpretation, visualization, and dissemination of scientific discoveries using high-throughput omics data.

Our multidisciplinary team works with biomedical research groups in the Harvard, MIT and Broad communities, and at local hospitals and industry. Our core has a strong educational mission. Members of the core participate in training activities, with the goal to enable experimentalists to analyze their data independently. The HBC emphasizes teamwork and a supportive environment where we learn from each other.
Basic Qualifications



Bachelor's Degree or equivalent experience required 4 years of experience in an academic or industry setting required Expertise in at least one of the following HTS applications is required: Whole genome or exome-sequencing Transcriptomics (bulk, small or single cell RNA-seq) Epigenomics (ChIP-seq or ATAC-seq)



Additional Qualifications and Skills


The following job-specific skills and competencies are preferred:
Master's degree Demonstrated ability to apply statistical approaches to analyze data, interpret and present results. Excellent analytical and programming skills. Knowledge of and experience with cancer datasets is a plus Ability to produce reproducible code (RMarkdown, Latex, Jupyter notebooks, etc) Experience with RShiny Experience with GitHub and previous publications Flexibility in adapting to changing research needs Strong, detailed-oriented writing and communication skills Experience working independently, as well as experience and/or desire to work in an interactive, collegial, and interdisciplinary group Excellent time management skills Interest in sharing expertise, training and/or teaching Strong interpersonal skills; experience and willingness to collaborate with and coordinate among other research groups
The following cultural competencies are also preferred:
Awareness of and aptitude to appropriately and effectively understand, respect, and adapt to cultural and identity-based difference within group environments Knowledge of and commitment to concepts and issues tied to social justice, diversity, equity, and inclusion Skills related to creating and supporting an environment that allows for inclusion, effective intercultural engagement, and personal humility and authenticity



Working Conditions



Work is performed in an office setting



Additional Information


Harvard University offers an outstanding benefits package including:
Time Off : 3-4 weeks paid vacation, paid holiday break, 12 paid sick days, 12+ paid holidays, and 3 paid personal days per year. Medical/Dental/Vision : Excellent and affordable medical, dental & vision plans, with coverage beginning as of an employee's start date. Retirement : University-funded retirement plan with full vesting after 3 years of service. Tuition Assistance & Reimbursement Programs : $40 per class at the Harvard Extension School, discounted options through participating Harvard graduate schools, and reimbursement options for accredited schools outside of Harvard. Transportation : 50% discount on MBTA passes, as well as additional options (rideshare, biking, etc.) to assist employees in their daily commute. Wellness & Professional Development : Programs and classes at little or no cost, including stress management, hard & soft skills development, career planning, massages, nutrition, meditation, and complimentary health services. Additionally, access to Harvard athletic facilities, libraries, campus eventsand many discounts for various cultural and leisure activities throughout metro Boston.

Join the Harvard T.H. Chan School of Public Health to support our mission of health research and education, and to be a part of the oldest institution of higher learning in the country!


The Harvard T.H. Chan School of Public Health does not provide visa sponsorship, now or in the future, for staff positions. Harvard University requires pre-employment reference checks and background screenings. This position has a 90 day orientation and review period.


The University requires all Harvard community members to be fully vaccinated against COVID-19 as detailed in Harvard's Vaccine Requirements. Individuals may claim exemption from the vaccine requirement for medical or religious reasons. More information regarding the University's COVID vaccination requirement, exemptions, and verification of vaccination status may be found at the University's "COVID-19 Vaccine Information" webpage.