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Bioinformatics specialist skills for your resume and career
15 bioinformatics specialist skills for your resume and career
1. Python
Python is a widely-known programming language. It is an object-oriented and all-purpose, coding language that can be used for software development as well as web development.
- Write SQL queries, Perl and Python scripts to aid with data extraction, processing, analysis and reporting.
- Created a Python script to read in protein data from multiple files and put them into a database.
2. Next-Generation Sequencing
- Build up infra-structure for next-generation sequencing data analysis.
- Performed SNP detection and analysis of Next-Generation Sequencing (NGS) data and bioinformatics services for various studies.
3. RNA-seq
- Performed comparison of RNA-seq and 3'-Tag Digital Gene Expression data to evaluate optimal choice for a study involving human gene expression
- Develop a spline fitting method along with a graphical user interface for ordering effect detection in single cell RNA-seq data.
4. Genome
- Designed and developed advanced web-based search engine using Perl, PHP and Berkley DB and MySql for human genome related literature.
- Designed and performed model-based gene expression analysis with whole genome tiling-microarray data sets using SAS.
5. NGS
- Developed best practice documentation for NGS analysis to enable transparent and reproducible data analysis.
- Coordinate various computational projects and supervise computational biologists for NGS data analysis.
6. Linux
Linux is a Unix-like operating system. Just like Windows, Mac OS, and IOS, Linux is an operating system used by millions across the globe. Android itself is powered by the Linux operating system. Linux manages all the hardware resources that are associated with your computer. The software is famous because of the protection it grants from viruses, malware, and crashes. The Linux operating system is entirely free and is an open-source software meaning it can be altered by those equipped with the knowledge to code.
- Administered and Maintained Linux system/server.
- Maintained and increased functionality of automation software tools, internal project web server and Oracle database under Linux system.
7. Unix
UNIX is a computer operating system that was first created in the 1960s and has been constantly updated since then. The operating system refers to the set of programs that enable a machine to function. It is a multi-user, multi-tasking device that works on computers, laptops, and servers. UNIX systems also have a graphical user interface (GUI), similar to Microsoft Windows, that makes it simple to use.
- Developed UNIX shell script, PERL and AWK program and applied TECPLOT software macro files to automate data processing and report.
- Work in both windows and unix environments
8. Perl
A Practical Extraction and Report Language, or simply PERL, is a programming language used for a script intended for syntax. You can see this when a particular web programmer or a junior developer creates a script for servers. It is used to manipulate text and utilize tasks such as web development, programming, and system administration.
- Designed and developed a methodology for antibody sequence annotation and implemented with PERL.
- Involved in developing Perl scripts to manage biological data.
9. Software Development
Software development is the mechanism by which programmers create computer programs. The Software Development Life Cycle (SDLC) is a framework for developing applications that follow technological needs and consumer requirements. It consists of many stages. The SDLC establishes an international standard that software developers can use to enhance and create their programs. It provides a well-defined framework for software developers to pursue in the production, maintenance, and design of premium quality software. The aim of the software development process is to create high-quality software on time and within budget.
- Acquired experience in software development.
- Served as subject matter expert in all software development related issues in the group.
10. Java
Java is a widely-known programming language that was invented in 1995 and is owned by Oracle. It is a server-side language that was created to let app developers "write once, run anywhere". It is easy and simple to learn and use and is powerful, fast, and secure. This object-oriented programming language lets the code be reused that automatically lowers the development cost. Java is specially used for android apps, web and application servers, games, database connections, etc. This programming language is closely related to C++ making it easier for the users to switch between the two.
- Designed client server database applications, based on Java and MySQL.
- Developed Java based parsing utility for different data types from different experiments from panomics studies.
11. Visualization
- Provided a diversity of data visualization tools.
- Designed visualization templates in Plotly (D3) and TIBCO Spotfire to visualize gene expression.
12. HPC
- Applied HT sequencing software on local Penguin HPC clusters and at TACC.
- Customized proprietary software for implementation on TACC HPC clusters.
13. Exome
- Project 1 : Exome Sequencing Data Analysis (Biliary Atresia Project).
14. Web Application
- Collaborate with proteomics scientists to identify and predict HDAC-interacting protein with database driven web application.
15. Sequence Analysis
- Develop and automate sequence analysis processes.
- Participated and assisted in the Nucleic Acid and Protein Sequence Analysis workshop.
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List of bioinformatics specialist skills to add to your resume

The most important skills for a bioinformatics specialist resume and required skills for a bioinformatics specialist to have include:
- Python
- Next-Generation Sequencing
- RNA-seq
- Genome
- NGS
- Linux
- Unix
- Perl
- Software Development
- Java
- Visualization
- HPC
- Exome
- Web Application
- Sequence Analysis
- PHP
- R
- Bioconductor
- Sequence Data
- Microarrays
- Statistical Analyses
- SNP
- Picard
- Data Analysis Pipeline
- Algorithm Development
- Clinical Trials
- PL/SQL
- Pathway Analysis
Updated January 8, 2025