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Clinical systems analyst salary
Average clinical systems analyst salary
$85,944
Understanding Clinical Systems Analyst Salaries
Clinical Systems Analysts play a crucial role in healthcare, bridging the gap between IT and clinical operations. Their main task is to ensure that healthcare information systems effectively support the delivery of patient care. As of October 2025, the average salary for a Clinical Systems Analyst is $85,944 annually, or approximately $41 per hour.
Factors affecting salary include geographic location, years of experience, and the specific healthcare sector in which one works. For instance, states like California and Massachusetts report higher salaries, reflecting local demand for healthcare IT professionals.
Job opportunities for Clinical Systems Analysts are projected to grow, driven by an increasing reliance on technology in healthcare. Analysts in specialized fields, such as electronic health records (EHR) systems, often command higher salaries. Moreover, pursuing certifications such as Certified Healthcare Technology Specialist (CHTS) can also enhance earning potential.
For those considering a career as a Clinical Systems Analyst, it's essential to research specific job roles and their corresponding salary ranges. This knowledge can guide your career path and help you make informed decisions about your future in healthcare IT.
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Where can a Clinical Systems Analyst earn more?
Clinical systems analyst salary estimates from across the web
Average clinical systems analyst salary by state
The highest-paying states for clinical systems analysts are California, Washington, and Delaware. The lowest average clinical systems analyst salary states are Louisiana, Missouri, and Oklahoma.
- State view
- County view
Highest paying states for clinical systems analysts
| Rank | State | Avg. salary | Hourly rate |
|---|---|---|---|
| 1 | Washington | $98,031 | $47.13 |
| 2 | Delaware | $98,015 | $47.12 |
| 3 | Rhode Island | $90,828 | $43.67 |
| 4 | Oregon | $92,966 | $44.70 |
| 5 | New Mexico | $90,039 | $43.29 |
| 6 | Nevada | $91,520 | $44.00 |
| 7 | Arizona | $84,942 | $40.84 |
| 8 | Idaho | $89,849 | $43.20 |
| 9 | Connecticut | $86,199 | $41.44 |
| 10 | Kentucky | $92,280 | $44.37 |
| 11 | Montana | $84,585 | $40.67 |
| 12 | Texas | $83,038 | $39.92 |
| 13 | North Dakota | $79,604 | $38.27 |
| 14 | Alaska | $84,499 | $40.62 |
| 15 | New York | $85,296 | $41.01 |
| 16 | California | $98,932 | $47.56 |
| 17 | New Hampshire | $87,463 | $42.05 |
| 18 | Pennsylvania | $80,968 | $38.93 |
| 19 | District of Columbia | $83,014 | $39.91 |
| 20 | Ohio | $81,030 | $38.96 |
| 21 | Minnesota | $80,408 | $38.66 |
| 22 | West Virginia | $78,747 | $37.86 |
| 23 | Hawaii | $83,542 | $40.16 |
| 24 | Illinois | $80,204 | $38.56 |
| 25 | New Jersey | $81,707 | $39.28 |
| 26 | Florida | $77,341 | $37.18 |
| 27 | South Dakota | $75,401 | $36.25 |
| 28 | Vermont | $78,170 | $37.58 |
| 29 | Virginia | $81,954 | $39.40 |
| 30 | Georgia | $78,689 | $37.83 |
| 31 | Maine | $76,408 | $36.73 |
| 32 | Maryland | $84,988 | $40.86 |
| 33 | South Carolina | $79,120 | $38.04 |
| 34 | Alabama | $78,726 | $37.85 |
| 35 | Tennessee | $75,874 | $36.48 |
| 36 | Wisconsin | $75,109 | $36.11 |
| 37 | Indiana | $76,437 | $36.75 |
| 38 | Nebraska | $74,503 | $35.82 |
| 39 | Wyoming | $73,179 | $35.18 |
| 40 | Iowa | $74,751 | $35.94 |
| 41 | Michigan | $74,247 | $35.70 |
| 42 | North Carolina | $72,395 | $34.81 |
| 43 | Utah | $75,933 | $36.51 |
| 44 | Massachusetts | $74,700 | $35.91 |
| 45 | Arkansas | $69,966 | $33.64 |
| 46 | Missouri | $71,336 | $34.30 |
| 47 | Kansas | $69,731 | $33.52 |
| 48 | Louisiana | $71,999 | $34.61 |
| 49 | Oklahoma | $70,814 | $34.05 |
| 50 | Colorado | $72,357 | $34.79 |
| 51 | Mississippi | $69,164 | $33.25 |
Highest paying cities for clinical systems analysts
The highest-paying cities for clinical systems analysts are Palo Alto, CA, Seattle, WA, and Manchester, NH.
| Rank | City | Avg. salary | Hourly rate |
|---|---|---|---|
| 1 | Palo Alto, CA | $106,861 | $51.38 |
| 2 | Seattle, WA | $98,534 | $47.37 |
| 3 | Manchester, NH | $87,427 | $42.03 |
| 4 | New York, NY | $85,458 | $41.09 |
| 5 | Phoenix, AZ | $85,061 | $40.89 |
| 6 | Rockville, MD | $84,904 | $40.82 |
| 7 | Houston, TX | $83,292 | $40.04 |
| 8 | Cleveland, OH | $81,731 | $39.29 |
| 9 | Hackensack, NJ | $81,721 | $39.29 |
| 10 | North Chicago, IL | $80,515 | $38.71 |
| 11 | Minneapolis, MN | $80,433 | $38.67 |
| 12 | Kingsport, TN | $78,060 | $37.53 |
| 13 | Fort Lauderdale, FL | $75,912 | $36.50 |
| 14 | Madison, WI | $75,010 | $36.06 |
| 15 | Boston, MA | $74,695 | $35.91 |
| 16 | Portage, MI | $73,841 | $35.50 |
| 17 | Raleigh, NC | $73,106 | $35.15 |
| 18 | Aurora, CO | $72,194 | $34.71 |
| 19 | Kansas City, MO | $70,949 | $34.11 |
| 20 | Kansas City, KS | $69,846 | $33.58 |
Clinical systems analyst salary details
A clinical systems analyst's salary ranges from $65,000 a year at the 10th percentile to $112,000 at the 90th percentile.
What is a clinical systems analyst's salary?
| Percentile | Annual salary | Monthly salary | Hourly rate |
|---|---|---|---|
| 90th Percentile | $112,000 | $9,333 | $54 |
| 75th Percentile | $99,000 | $8,250 | $48 |
| Average | $85,944 | $7,162 | $41 |
| 25th Percentile | $74,000 | $6,167 | $36 |
| 10th Percentile | $65,000 | $5,417 | $31 |
Highest paying clinical systems analyst jobs
The highest paying types of clinical systems analysts are lead system analyst, business systems senior analyst, and oracle functional consultant.
| Job title | Annual salary | Monthly salary | Hourly rate | Job openings |
|---|---|---|---|---|
| Oracle Functional Consultant | $97,036 | $8,086 | $46.65 | 46,331 |
| Analyst Lead | $95,264 | $7,939 | $45.80 | 122,353 |
| Analyst | $73,007 | $6,084 | $35.10 | 253,138 |
| Software Analyst | $78,400 | $6,533 | $37.69 | 274,053 |
| Document Analyst | $40,678 | $3,390 | $19.56 | 51,467 |
| GIS Analyst | $63,718 | $5,310 | $30.63 | 49,491 |
Top companies hiring clinical systems analysts now:
Which companies pay clinical systems analysts the most?
Clinical systems analyst salaries at AbbVie and East Tennessee Children's Hospital are the highest-paying according to our most recent salary estimates. In addition, the average clinical systems analyst salary at companies like Houston Methodist and Children's Minnesota are highly competitive.
| Rank | Company | Average salary | Hourly rate |
|---|---|---|---|
| 1 | AbbVie | $113,834 | $54.73 |
| 2 | East Tennessee Children's Hospital | $104,685 | $50.33 |
| 3 | Houston Methodist | $104,502 | $50.24 |
| 4 | Children's Minnesota | $103,766 | $49.89 |
| 5 | Community Health Systems | $102,296 | $49.18 |
| 6 | Stanford Health Care | $101,573 | $48.83 |
| 7 | Abbott | $101,413 | $48.76 |
| 8 | Community Medical Center | $99,268 | $47.73 |
| 9 | Moffitt Cancer Center | $99,088 | $47.64 |
| 10 | Tufts Health Plan | $98,185 | $47.20 |
| 11 | Summit Health Oregon | $98,105 | $47.17 |
| 12 | St. John's Episcopal Hospital | $96,788 | $46.53 |
| 13 | Allscripts | $96,599 | $46.44 |
| 14 | Harris Health System | $95,978 | $46.14 |
| 15 | Beaumont Health | $95,904 | $46.11 |
| 16 | Phoebe Putney Memorial Hospital Inc | $95,364 | $45.85 |
| 17 | Phoenix Children's | $95,045 | $45.69 |
| 18 | Cleveland Clinic | $94,447 | $45.41 |
| 19 | Baptist Health Care | $94,408 | $45.39 |
| 20 | CHRISTUS Health | $94,113 | $45.25 |
Wage gap by gender, race and education
Clinical systems analyst salary trends
The average clinical systems analyst salary has risen by $13,840 over the last ten years. In 2014, the average clinical systems analyst earned $72,104 annually, but today, they earn $85,944 a year. That works out to a 8% change in pay for clinical systems analysts over the last decade.
Compare clinical systems analyst salaries for cities or states with the national average over time.
Average clinical systems analyst salary over time
Compare clinical systems analyst salaries for individual cities or states with the national average.
Clinical systems analyst salary by year
| Year | Avg. salary | Hourly rate | % Change |
|---|---|---|---|
| 2026 | $85,900 | $41.32 | +3.3% |
| 2025 | $83,100 | $39.96 | +2.3% |
| 2024 | $81,200 | $39.05 | +0.5% |
| 2023 | $80,800 | $38.85 | +1.2% |
| 2022 | $79,800 | $38.38 | +1.6% |
Recently added clinical systems analyst salaries
| Company | Job | Location | Date added | Salary |
|---|---|---|---|---|
| Taylorville Memorial Hospital | 2110, Clinical Systems Analyst II | Springfield, IL | 06/13/2025 | $71,668 |
| Freeman Health System | Epic RN Inpatient Clinical System Analyst | Joplin, MO | 06/11/2025 | $75,709 |
| Adventist Healthcare | Oracle Surginet Clinical Information System Analyst III, Day Shift, Clinical Informatics | Gaithersburg, MD | 06/10/2025 | $96,059 |
| Cleveland Clinic | Clinical Systems Analyst-340B Contract Pharmacy | Cleveland, OH | 06/10/2025 | $52,446 |
| Lake Region Healthcare | Clinical Systems Analyst-Registered Nurse (RN) | Fergus Falls, MN | 06/02/2025 | $72,920 |
| Surgical Care Affiliates | Clinical Systems Analyst | Philadelphia, PA | 05/21/2025 | $75,000 |
| Volpara Health | Senior Clinical Systems Analyst (US) | Lynnwood, WA | 05/17/2025 | $130,000 |
| Usc | Clinical Information Systems Analyst, Senior-IS Clinical Core Applications-Days | Ione, CA | 05/15/2025 | $110,240 |
| Stanford Health Care | Clinical Systems Analyst (Pharmacy/Epic Willow) | Palo Alto, PA | 05/12/2025 | $113,157 |
| Stanford Health Care | Clinical Systems Analyst (Pharmacy/Epic Willow) | Palo Alto, CA | 05/10/2025 | $113,157 |
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