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Computational biologist skills for your resume and career
15 computational biologist skills for your resume and career
1. Python
Python is a widely-known programming language. It is an object-oriented and all-purpose, coding language that can be used for software development as well as web development.
- Designed and employed ad hoc tools in Perl and Python for analysis and display of complex data sets.
- Developed workflow for genotyping including custom script development in Python.
2. Machine Learning
- Developed new bioinformatics methods in RNA-seq variant classification using machine learning.
- Used existing machine learning methods and tools such as SVM for the data analysis and trends predictions.
3. Next-Generation Sequencing
- Build up infra-structure for next-generation sequencing data analysis.
- Project 1: Built a clinical bioinformatics pipeline to process the Next-Generation Sequencing Data for Cancer Patients.
4. C++
C++ is a general-purpose programming language that is used to create high-performing applications. It was invented as an extension to the C language. C++ lets the programmer have a high level of domination over memory and system resources. C++ is an object-oriented language that helps you implement real-time issues based on different data functions
- Designed and wrote code for parallelizing algorithms on a blade farm using an LSF scheduler using C++ on Linux.
5. Visualization
- Provided a diversity of data visualization tools.
- Designed visualization templates in Plotly (D3) and TIBCO Spotfire to visualize gene expression.
6. Biological Data
Biological Data refers to the information gathered from a living organism. This may be regarding the organism's genetic code, the products made from the organism, or the environment where the organism was found. This information is added to a biological database, which can then be accessed by biologists to review previously gathered data and genetic code.
- Managed all of the biological data for the division on DEC VAX and PC computer systems.
- Collected vessel activity and biological data while compelling compliance with federal regulations.
7. RNA-seq
- Performed comparison of RNA-seq and 3'-Tag Digital Gene Expression data to evaluate optimal choice for a study involving human gene expression
- Reduced the operation cost of RNA-seq data processing procedure by optimizing and automating the pipeline on HPC clusters.
8. Java
Java is a widely-known programming language that was invented in 1995 and is owned by Oracle. It is a server-side language that was created to let app developers "write once, run anywhere". It is easy and simple to learn and use and is powerful, fast, and secure. This object-oriented programming language lets the code be reused that automatically lowers the development cost. Java is specially used for android apps, web and application servers, games, database connections, etc. This programming language is closely related to C++ making it easier for the users to switch between the two.
- Prototyped and evaluated algorithms in MATLAB, Java, and C++.
- Web site design utilizing PHP, CSS, HTML, MySQL, Java.
9. NGS
- Developed best practice documentation for NGS analysis to enable transparent and reproducible data analysis.
- Served as scrum master and temporary PM Successfully finished MongoDB NoSQL POC and Cloudera Hadoop POC projects for the NGS data
10. Computational Methods
- Used statistical, mathematical and computational methods to formulate and program mathematical model for computer simulation of biological tissue development.
11. Linux
Linux is a Unix-like operating system. Just like Windows, Mac OS, and IOS, Linux is an operating system used by millions across the globe. Android itself is powered by the Linux operating system. Linux manages all the hardware resources that are associated with your computer. The software is famous because of the protection it grants from viruses, malware, and crashes. The Linux operating system is entirely free and is an open-source software meaning it can be altered by those equipped with the knowledge to code.
- Performed Linux cluster administration and ensured efficient use of measurement resources throughout facility.
- Maintained and increased functionality of automation software tools, internal project web server and Oracle database under Linux system.
12. Unix
UNIX is a computer operating system that was first created in the 1960s and has been constantly updated since then. The operating system refers to the set of programs that enable a machine to function. It is a multi-user, multi-tasking device that works on computers, laptops, and servers. UNIX systems also have a graphical user interface (GUI), similar to Microsoft Windows, that makes it simple to use.
- Developed UNIX shell script, PERL and AWK program and applied TECPLOT software macro files to automate data processing and report.
- Performed genetic research, using tools like GCG, BLAST, FASTA, pFAM on UNIX (SUN Solaris).
13. DNA
Deoxyribonucleic acid, or only DNA, which is considered the king of molecules, is a macromolecule that contains the main component of chromosomes. Shaped like a double helix, DNA is usually found in the nucleus of a cell. It is a type of material that transports characteristics in many forms, developed in nucleotides around one another.
- Designed experiments to understand DNA damage response pathway dynamics in order to find drug combinations for MM-398 and MM-302 teams.
- Conducted Literature annotation of E-coli proteins, particularly transporters, DNA repair, outer membranes and secretion systems for EcoCyc project.
14. New Algorithms
- Developed new algorithms to analyze the special usage of the new arrays.
15. Perl
A Practical Extraction and Report Language, or simply PERL, is a programming language used for a script intended for syntax. You can see this when a particular web programmer or a junior developer creates a script for servers. It is used to manipulate text and utilize tasks such as web development, programming, and system administration.
- Designed and developed a methodology for antibody sequence annotation and implemented with PERL.
- Created Perl scripts to aid scientists in their data collection, analysis, and results.
What skills help Computational Biologists find jobs?
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What skills stand out on computational biologist resumes?
Joseph Kezele
Associate Professor of Biology, Arizona Christian University
What soft skills should all computational biologists possess?
Joseph Kezele
Associate Professor of Biology, Arizona Christian University
What computational biologist skills would you recommend for someone trying to advance their career?
Teaching Assistant Professor, Kansas State University
What type of skills will young computational biologists need?
Meredith O'Hara Ph.D.
Associate Dean at College of Science and Engineering, Houston Baptist University
List of computational biologist skills to add to your resume
The most important skills for a computational biologist resume and required skills for a computational biologist to have include:
- Python
- Machine Learning
- Next-Generation Sequencing
- C++
- Visualization
- Biological Data
- RNA-seq
- Java
- NGS
- Computational Methods
- Linux
- Unix
- DNA
- New Algorithms
- Perl
- HIV
- Data Management
- Regression
- Experimental Data
- Experimental Design
- Sequence Analysis
- HPC
- Novel Algorithms
- Computational Support
- R
- Stem Cells
- SNP
- Pathogens
- Comparative Analysis
- PCR
- Elisa
Updated January 8, 2025