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Bioinformatics software engineer salary
Average bioinformatics software engineer salary
$99,311
Average Bioinformatics Software Engineer Salary
The average salary for a bioinformatics software engineer in the United States is approximately $99,311 annually, equating to around $48 per hour. Salaries vary based on factors such as experience and geographic location. For instance, entry-level positions typically start lower, while experienced professionals can earn significantly more. Understanding these distinctions is vital for job seekers in this field.
Where Bioinformatics Software Engineers Earn More
Bioinformatics software engineers often find higher salaries in states like California, Massachusetts, and Washington. These regions offer competitive pay due to a concentration of tech companies and research institutions. Additionally, industries such as pharmaceuticals and healthcare tend to provide the highest compensation packages. Job seekers should consider both location and industry when evaluating potential earnings in bioinformatics.
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Where can a Bioinformatics Software Engineer earn more?
Bioinformatics software engineer salary estimates from across the web
Average bioinformatics software engineer salary by state
The average bioinformatics software engineer salary in California, Oregon, and Idaho are the highest in the U.S. The lowest average bioinformatics software engineer salary states are Kansas, Iowa, and Wyoming.
- State view
- County view
Highest paying states for bioinformatics software engineers
| Rank | State | Avg. salary | Hourly rate |
|---|---|---|---|
| 1 | California | $121,043 | $58.19 |
| 2 | Oregon | $116,910 | $56.21 |
| 3 | Utah | $101,257 | $48.68 |
| 4 | Idaho | $107,483 | $51.67 |
| 5 | Washington | $95,988 | $46.15 |
| 6 | Massachusetts | $97,770 | $47.00 |
| 7 | Nevada | $107,017 | $51.45 |
| 8 | Arizona | $99,747 | $47.96 |
| 9 | Texas | $93,982 | $45.18 |
| 10 | New Hampshire | $93,270 | $44.84 |
| 11 | Alaska | $105,088 | $50.52 |
| 12 | Rhode Island | $87,895 | $42.26 |
| 13 | Delaware | $90,070 | $43.30 |
| 14 | New York | $94,111 | $45.25 |
| 15 | District of Columbia | $93,621 | $45.01 |
| 16 | South Carolina | $94,940 | $45.64 |
| 17 | Montana | $86,433 | $41.55 |
| 18 | Colorado | $89,527 | $43.04 |
| 19 | Maine | $90,047 | $43.29 |
| 20 | Virginia | $88,113 | $42.36 |
| 21 | Vermont | $85,646 | $41.18 |
| 22 | Louisiana | $87,706 | $42.17 |
| 23 | Illinois | $85,744 | $41.22 |
| 24 | Maryland | $84,742 | $40.74 |
| 25 | Wisconsin | $83,602 | $40.19 |
| 26 | New Jersey | $84,655 | $40.70 |
| 27 | New Mexico | $82,911 | $39.86 |
| 28 | Michigan | $82,650 | $39.74 |
| 29 | Connecticut | $85,889 | $41.29 |
| 30 | Minnesota | $82,870 | $39.84 |
| 31 | Indiana | $81,350 | $39.11 |
| 32 | Alabama | $81,690 | $39.27 |
| 33 | North Dakota | $82,035 | $39.44 |
| 34 | Arkansas | $79,092 | $38.02 |
| 35 | Georgia | $82,082 | $39.46 |
| 36 | Missouri | $82,974 | $39.89 |
| 37 | Pennsylvania | $79,092 | $38.02 |
| 38 | North Carolina | $78,804 | $37.89 |
| 39 | Ohio | $79,315 | $38.13 |
| 40 | Nebraska | $79,754 | $38.34 |
| 41 | Florida | $81,741 | $39.30 |
| 42 | Oklahoma | $80,097 | $38.51 |
| 43 | Mississippi | $79,364 | $38.16 |
| 44 | Wyoming | $74,888 | $36.00 |
| 45 | Tennessee | $77,301 | $37.16 |
| 46 | Kansas | $76,367 | $36.71 |
| 47 | Kentucky | $77,009 | $37.02 |
| 48 | Iowa | $75,994 | $36.54 |
| 49 | West Virginia | $74,167 | $35.66 |
| 50 | Hawaii | $70,814 | $34.05 |
| 51 | South Dakota | $72,092 | $34.66 |
Highest paying cities for bioinformatics software engineers
The highest-paying cities for bioinformatics software engineers are San Francisco, CA, Salt Lake City, UT, and Boston, MA.
| Rank | City | Avg. salary | Hourly rate |
|---|---|---|---|
| 1 | San Francisco, CA | $136,590 | $65.67 |
| 2 | Salt Lake City, UT | $101,142 | $48.63 |
| 3 | Boston, MA | $97,811 | $47.02 |
| 4 | Seattle, WA | $96,552 | $46.42 |
| 5 | New York, NY | $94,304 | $45.34 |
| 6 | Newark, DE | $90,029 | $43.28 |
| 7 | Boulder, CO | $89,832 | $43.19 |
| 8 | Stamford, CT | $85,742 | $41.22 |
| 9 | Baltimore, MD | $84,918 | $40.83 |
| 10 | Madison, WI | $83,332 | $40.06 |
| 11 | Kansas City, MO | $82,899 | $39.86 |
| 12 | Atlanta, GA | $81,761 | $39.31 |
| 13 | Memphis, TN | $77,520 | $37.27 |
Bioinformatics software engineer salary details
A bioinformatics software engineer's salary ranges from $72,000 a year at the 10th percentile to $136,000 at the 90th percentile.
What is a bioinformatics software engineer's salary?
| Percentile | Annual salary | Monthly salary | Hourly rate |
|---|---|---|---|
| 90th Percentile | $136,000 | $11,333 | $65 |
| 75th Percentile | $117,000 | $9,750 | $56 |
| Average | $99,311 | $8,276 | $48 |
| 25th Percentile | $84,000 | $7,000 | $40 |
| 10th Percentile | $72,000 | $6,000 | $35 |
Highest paying bioinformatics software engineer jobs
The highest paying types of bioinformatics software engineers are staff software engineer, principal software engineer, and software engineer lead.
| Job title | Annual salary | Monthly salary | Hourly rate | Job openings |
|---|---|---|---|---|
| Engineer | $92,076 | $7,673 | $44.27 | 618,207 |
| Software Architect | $114,406 | $9,534 | $55.00 | 319,594 |
| Devops Engineer | $104,019 | $8,668 | $50.01 | 257,025 |
| Software Developer | $87,521 | $7,293 | $42.08 | 294,329 |
| Lead Software Developer | $115,072 | $9,589 | $55.32 | 309,029 |
| Data Engineer | $109,675 | $9,140 | $52.73 | 303,105 |
Top companies hiring bioinformatics software engineers now:
Which companies pay bioinformatics software engineers the most?
Bioinformatics software engineer salaries at Memorial Sloan Kettering Cancer Center and Invitae are the highest-paying according to our most recent salary estimates. In addition, the average bioinformatics software engineer salary at companies like Novartis and Genentech are highly competitive.
| Rank | Company | Average salary | Hourly rate |
|---|---|---|---|
| 1 | Memorial Sloan Kettering Cancer Center | $119,706 | $57.55 |
| 2 | Invitae | $115,371 | $55.47 |
| 3 | Novartis | $114,485 | $55.04 |
| 4 | Genentech | $112,662 | $54.16 |
| 5 | Hoffmann-LA Roche Inc | $110,776 | $53.26 |
| 6 | Cell Signaling Technology | $107,216 | $51.55 |
| 7 | Agilent Technologies | $106,992 | $51.44 |
| 8 | Fred Hutch | $102,998 | $49.52 |
| 9 | Dev | $102,467 | $49.26 |
| 10 | Ancestry US Holdings Inc | $99,960 | $48.06 |
| 11 | TWO95 International | $99,936 | $48.05 |
| 12 | OmniTier | $99,855 | $48.01 |
| 13 | GRAIL | $99,755 | $47.96 |
| 14 | Avila Therapeutics | $99,507 | $47.84 |
| 15 | Illumina | $98,737 | $47.47 |
| 16 | University of California | $98,666 | $47.44 |
| 17 | Dana-Farber Cancer Institute | $98,131 | $47.18 |
| 18 | Netskope | $97,964 | $47.10 |
| 19 | Bionano Genomics | $96,790 | $46.53 |
| 20 | University of Maryland, Baltimore | $96,389 | $46.34 |
Wage gap by gender, race and education
Bioinformatics Software Engineer salary by industry
The average bioinformatics software engineer salary varies across industries:
- The average bioinformatics software engineer salary in the professional industry is $101,142, the highest of any industry.
- The average bioinformatics software engineer salary in the finance industry is $100,021.
- Bioinformatics software engineers in the health care industry earn an average salary of $98,495, the lowest of any industry.
Highest paying industries for bioinformatics software engineers
| Rank | Industry | Average salary | Hourly rate |
|---|---|---|---|
| 1 | Professional | $101,142 | $48.63 |
| 2 | Technology | $100,021 | $48.09 |
| 3 | Pharmaceutical | $99,906 | $48.03 |
| 4 | Health Care | $98,495 | $47.35 |
High paying bioinformatics software engineer jobs
Bioinformatics software engineer salary trends
The average bioinformatics software engineer salary has risen by $18,436 over the last ten years. In 2014, the average bioinformatics software engineer earned $80,875 annually, but today, they earn $99,311 a year. That works out to a 10% change in pay for bioinformatics software engineers over the last decade.
Compare bioinformatics software engineer salaries for cities or states with the national average over time.
Average bioinformatics software engineer salary over time
Compare bioinformatics software engineer salaries for individual cities or states with the national average.
Bioinformatics software engineer salary by year
| Year | Avg. salary | Hourly rate | % Change |
|---|---|---|---|
| 2025 | $99,300 | $47.75 | +3.3% |
| 2024 | $96,000 | $46.17 | +2.3% |
| 2023 | $93,900 | $45.13 | +1.8% |
| 2022 | $92,200 | $44.33 | +1.7% |
| 2021 | $90,700 | $43.59 | +1.8% |
Recently added bioinformatics software engineer salaries
| Company | Job | Location | Date added | Salary |
|---|---|---|---|---|
| Illumina | SR Bioinformatics Software Engineer | San Diego, CA | 06/27/2025 | $126,800 |
| Memorial Sloan-Kettering Cancer Center | Bioinformatics Software Engineer IV | New York, NY | 06/24/2025 | $134,600 |
| Grail | Staff Bioinformatics Software Engineer #4151 | Menlo Park, CA | 05/26/2025 | $163,000 |
| Tempus | Bioinformatics Software Engineer | Boca Raton, FL | 05/15/2025 | $85,000 |
| Guardant Health | Bioinformatics Software Engineer II | Palo Alto, CA | 04/30/2025 | $114,800 |
| Sarepta Therapeutics | Bioinformatics Software Engineer | Cambridge, MA | 04/29/2025 | $100,000 |
| Memorial Sloan Kettering Cancer Center | Bioinformatics Software Engineer II | New York, NY | 03/31/2025 | $100,600 |
| Sarepta Therapeutics Inc. | Bioinformatics Software Engineer | Columbus, OH | 03/29/2025 | $100,000 |
| Sarepta Therapeutics Inc. | Bioinformatics Software Engineer | Philadelphia, PA | 03/29/2025 | $100,000 |
| Sarepta Therapeutics Inc. | Bioinformatics Software Engineer | Cambridge, MA | 03/29/2025 | $100,000 |
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